Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PRAD rs2091560 chr4:165644137 T/A 5.56E-5 493 30.77 33.13 44.32 KM Plot
PRAD rs2091561 chr4:165644140 C/T 5.56E-5 493 30.77 33.13 44.32 KM Plot
PRAD rs2091562 chr4:165644262 G/C 5.56E-5 493 30.77 33.13 44.32 KM Plot
PRAD rs2091563 chr4:165644301 A/T 5.56E-5 493 30.77 33.13 44.32 KM Plot
PRAD rs2099942 chr22:18438314 A/C 1.17E-6 491 30.27 32.5 26.03 KM Plot
PRAD rs2099943 chr22:18438559 A/G 1.17E-6 490 30.53 32.5 26.03 KM Plot
PRAD rs2099944 chr22:18438578 G/A 1.17E-6 490 30.53 32.5 26.03 KM Plot
PRAD rs2099945 chr22:18438642 G/C 5.53E-6 490 30.8 32.43 26.2 KM Plot
PRAD rs2126503 chr19:53154820 C/T 1.38E-8 490 30.9 30.93 26.13 KM Plot
PRAD rs2154375 chr1:68281026 T/C 7.81E-5 491 30.93 29.23 36.87 KM Plot
PRAD rs2174506 chr1:31784363 T/C 8.26E-6 493 30.97 31.28 22.87 KM Plot
PRAD rs218297 chr6:108448566 C/T 4.11E-15 494 31.93 27.72 29.17 KM Plot
PRAD rs2235563 chr1:6724105 A/G 0.000136 494 30.37 31.13 29.7 KM Plot
PRAD rs2235564 chr1:6713114 C/T 5.22E-5 494 29.6 31.37 28.67 KM Plot
PRAD rs2237124 chr6:15490359 A/G 3.04E-5 494 30.8 31.4 29.25 KM Plot